Curate protein half-lives

[jonrkarr]

• Human
  • Supporting Information of Turnover of the Human Proteome: Determination of Protein Intracellular Stability by Dynamic SILAC (10.1021/pr800641v)
  • Table S4-S9 of Proteome Half-Life Dynamics in Living Human Cells
    (10.1126/science.1199784)
  • Supplementary Data 2 of Systematic analysis of protein turnover in primary cells (10.1038/s41467-018-03106-1)
  • Supplementary Information 2 of Systems-wide Proteomic Analysis in Mammalian Cells Reveals Conserved, Functional Protein Turnover (10.1021/pr101183k)
• Mouse
  • Supplementary Table 3 of Global quantification of mammalian gene expression control
    (10.1038/nature10098)
  • Column k0 of Table S2 of Dataset S01 of Analysis of proteome dynamics in the mouse brain
    (10.1073/pnas.1006551107)
• Yeast
  • Table S1 and Table S2 of Global Proteome Turnover Analyses of the Yeasts S. cerevisiae and S. pombe (10.1016/j.celrep.2014.10.065)
  • Supporting Data Set 1 of Quantification of protein half-lives in the budding yeast proteome (10.1073/pnas.0605420103)
• Mycoplama pneumoniae
  • Table S4 of Quantification of mRNA and protein and integration with protein turnover in a bacterium (10.1038/msb.2011.38)

Ignore

• Table S2 of Global Protein Stability Profiling in Mammalian Cells (10.1126/science.1160489): units are not clear
• Table II of Dynamics of Protein Turnover, a Missing Dimension in Proteomics (10.1074/mcp.M200046-MCP200): lacks protein ids
• Table S1, S2 of Identification of long-lived synaptic proteins by proteomic analysis of synaptosome protein turnover
  (10.1073/pnas.1720956115): lacks units
• Supplementary Table of A Quantitative Spatial Proteomics Analysis of Proteome Turnover in Human Cells (10.1074/mcp.M111.011429): lacks units
• Table S2 of Intrinsically Disordered Segments Affect Protein Half-Life in the Cell and during Evolution (10.1016/j.celrep.2014.07.055): uses data from Quantification of protein half-lives in the budding yeast proteome