Hi, first of all thanks for the awesome work!
I'm thinking about using CUDASW to go through a chunk of the NR database (around 300 million seqs). It would be really great if CSW could give me output in TSV format, showing details about the start and end positions of alignments (like query start / end and the same for subjects).
I'm thinking about TSV Blast format 6 (https://www.ncbi.nlm.nih.gov/books/NBK279684/table/appendices.T.options_common_to_all_blast/).
have a great day
Hi, first of all thanks for the awesome work!
I'm thinking about using CUDASW to go through a chunk of the NR database (around 300 million seqs). It would be really great if CSW could give me output in TSV format, showing details about the start and end positions of alignments (like query start / end and the same for subjects).
I'm thinking about TSV Blast format 6 (https://www.ncbi.nlm.nih.gov/books/NBK279684/table/appendices.T.options_common_to_all_blast/).
have a great day