diff --git a/.gitattributes b/.gitattributes
new file mode 100644
index 0000000..6ecc09f
--- /dev/null
+++ b/.gitattributes
@@ -0,0 +1,6 @@
+* text=auto eol=lf
+*.cu text eol=lf
+*.py text eol=lf
+*.md text eol=lf
+*.bat text eol=crlf
+*.cmd text eol=crlf
\ No newline at end of file
diff --git a/.github/workflows/CI-daily.yml b/.github/workflows/CI-daily.yml
deleted file mode 100644
index 38cd716..0000000
--- a/.github/workflows/CI-daily.yml
+++ /dev/null
@@ -1,70 +0,0 @@
-# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
-# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
-
-name: Continuous Integration
-
-on:
-  schedule:
-    # Runs 'at 00:00 on every day' UTC time.
-    # You can adjust the time. Use cron syntax (minute hour day month day-of-week).
-    # See: https://crontab.guru for help with cron syntax.
-    # Example: '0 3 * * *' runs at 3:00 AM UTC daily.
-    - cron: '0 0 * * *'
-
-  # OPTIONAL: Add other triggers if you want tests to run more often
-  # For example, run on pushes and pull requests to the main branch:
-  # push:
-  #   branches: [ main ]
-  # pull_request:
-  #   branches: [ main ]
-
-  # OPTIONAL: Allow manual triggering from the Actions tab
-  workflow_dispatch:
-
-
-permissions:
-  contents: read  # to fetch code
-  actions: write  # to cancel previous workflows
-
-# This is what will cancel the workflow
-concurrency:
-  group: ${{ github.workflow }}-${{ github.ref }}
-  cancel-in-progress: true
-
-jobs:
-  test_linux:
-    runs-on: ubuntu-latest
-    strategy:
-      fail-fast: false
-      matrix:
-        python-version: ["3.13"]
-        jax-version: ["0.7.1", "0.8.0", ""]
-
-    steps:
-      - name: Cancel Previous Runs
-        uses: styfle/cancel-workflow-action@0.13.1
-        with:
-          access_token: ${{ github.token }}
-      - uses: actions/checkout@v6
-      - name: Print concurrency group
-        run: echo '${{ github.workflow }}-${{ github.ref }}'
-      - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v6
-        with:
-          python-version: ${{ matrix.python-version }}
-      - name: Install dependencies
-        run: |
-          python -m pip cache purge
-          python -m pip install --upgrade pip setuptools
-          python -m pip install -r requirements.txt
-          python -m pip install pytest
-          if [ "${{ matrix.jax-version }}" == "" ]; then
-            python -m pip install jax || exit 1
-          else
-            python -m pip install jax==${{ matrix.jax-version }} || exit 1
-          fi
-          python -m pip install . || exit 1
-      - name: Test with pytest
-        run: |
-          pytest BrainX/
-
diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml
index addeb34..035d887 100644
--- a/.github/workflows/CI.yml
+++ b/.github/workflows/CI.yml
@@ -1,4 +1,6 @@
-# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
+# This workflow installs Python dependencies and runs the test suite across
+# operating systems on every push/PR, and additionally runs a JAX-version
+# compatibility matrix on a daily schedule.
 # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
 
 name: Continuous Integration
@@ -8,34 +10,36 @@ on:
     branches:
       - main
   pull_request:
+  schedule:
+    # Runs at 00:00 UTC every day. See https://crontab.guru for cron syntax.
+    - cron: '0 0 * * *'
+  workflow_dispatch:
 
 
 permissions:
   contents: read  # to fetch code
   actions: write  # to cancel previous workflows
 
-# This is what will cancel the workflow
+# Cancel in-progress runs for the same ref
 concurrency:
   group: ${{ github.workflow }}-${{ github.ref }}
   cancel-in-progress: true
 
 
 jobs:
-  test_linux:
-    runs-on: ubuntu-latest
+  # Cross-platform test suite on push, pull request, and manual runs.
+  test:
+    if: github.event_name != 'schedule'
+    name: Test (${{ matrix.os }}, Python ${{ matrix.python-version }})
+    runs-on: ${{ matrix.os }}
     strategy:
       fail-fast: false
       matrix:
+        os: [ ubuntu-latest, macos-latest, windows-latest ]
         python-version: [ "3.13" ]
 
     steps:
-      - name: Cancel Previous Runs
-        uses: styfle/cancel-workflow-action@0.13.1
-        with:
-          access_token: ${{ github.token }}
       - uses: actions/checkout@v6
-      - name: Print concurrency group
-        run: echo '${{ github.workflow }}-${{ github.ref }}'
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v6
         with:
@@ -43,30 +47,27 @@ jobs:
       - name: Install dependencies
         run: |
           python -m pip cache purge
-          python -m pip install --upgrade pip setuptools   --no-cache-dir
-          python -m pip install -r requirements.txt  --no-cache-dir
-          python -m pip install pytest  --no-cache-dir
-          pip install .  --no-cache-dir
+          python -m pip install --upgrade pip setuptools --no-cache-dir
+          python -m pip install -r requirements.txt --no-cache-dir
+          python -m pip install pytest --no-cache-dir
+          python -m pip install . --no-cache-dir
       - name: Test with pytest
         run: |
           pytest BrainX/
 
-
-  test_macos:
-    runs-on: macos-latest
+  # Daily / manual JAX-version compatibility matrix on Linux.
+  test_jax_compatibility:
+    if: github.event_name == 'schedule' || github.event_name == 'workflow_dispatch'
+    name: JAX compat (jax ${{ matrix.jax-version || 'latest' }})
+    runs-on: ubuntu-latest
     strategy:
       fail-fast: false
       matrix:
         python-version: [ "3.13" ]
+        jax-version: [ "0.7.1", "0.8.0", "0.9.0", "" ]
 
     steps:
-      - name: Cancel Previous Runs
-        uses: styfle/cancel-workflow-action@0.13.1
-        with:
-          access_token: ${{ github.token }}
       - uses: actions/checkout@v6
-      - name: Print concurrency group
-        run: echo '${{ github.workflow }}-${{ github.ref }}'
       - name: Set up Python ${{ matrix.python-version }}
         uses: actions/setup-python@v6
         with:
@@ -74,42 +75,15 @@ jobs:
       - name: Install dependencies
         run: |
           python -m pip cache purge
-          python -m pip install --upgrade pip setuptools  --no-cache-dir
-          python -m pip install -r requirements.txt  --no-cache-dir
-          python -m pip install pytest  --no-cache-dir
-          pip install .  --no-cache-dir
+          python -m pip install --upgrade pip setuptools
+          python -m pip install -r requirements.txt
+          python -m pip install pytest
+          if [ "${{ matrix.jax-version }}" == "" ]; then
+            python -m pip install jax || exit 1
+          else
+            python -m pip install jax==${{ matrix.jax-version }} || exit 1
+          fi
+          python -m pip install . || exit 1
       - name: Test with pytest
         run: |
           pytest BrainX/
-
-
-  test_windows:
-    runs-on: windows-latest
-    strategy:
-      fail-fast: false
-      matrix:
-        python-version: [ "3.13" ]
-
-    steps:
-      - name: Cancel Previous Runs
-        uses: styfle/cancel-workflow-action@0.13.1
-        with:
-          access_token: ${{ github.token }}
-      - uses: actions/checkout@v6
-      - name: Print concurrency group
-        run: echo '${{ github.workflow }}-${{ github.ref }}'
-      - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v6
-        with:
-          python-version: ${{ matrix.python-version }}
-      - name: Install dependencies
-        run: |
-          python -m pip cache purge
-          python -m pip install --upgrade pip setuptools  --no-cache-dir
-          python -m pip install -r requirements.txt  --no-cache-dir
-          python -m pip install pytest  --no-cache-dir
-          pip install .  --no-cache-dir
-      - name: Test with pytest
-        run: |
-          pytest BrainX/ 
-
diff --git a/.github/workflows/Publish.yml b/.github/workflows/Publish.yml
index 1dd255a..2598cfd 100644
--- a/.github/workflows/Publish.yml
+++ b/.github/workflows/Publish.yml
@@ -25,7 +25,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v6
         with:
-          python-version: '3.12'
+          python-version: '3.13'
 
       - name: Install build tooling
         run: |
diff --git a/.readthedocs.yml b/.readthedocs.yml
index 9694f96..dc132e3 100644
--- a/.readthedocs.yml
+++ b/.readthedocs.yml
@@ -6,9 +6,9 @@
 version: 2
 
 build:
-  os: "ubuntu-20.04"
+  os: "ubuntu-24.04"
   tools:
-    python: "3.12"
+    python: "3.14"
 
 # Build documentation in the docs/ directory with Sphinx
 sphinx:
diff --git a/BrainX/__init__.py b/BrainX/__init__.py
index 264a80f..7166ecc 100644
--- a/BrainX/__init__.py
+++ b/BrainX/__init__.py
@@ -16,5 +16,5 @@
 # -*- coding: utf-8 -*-
 
 
-__version__ = "2026.3.12"
+__version__ = "2026.6.8"
 __version_info__ = tuple(map(int, __version__.split(".")))
diff --git a/BrainX/py.typed b/BrainX/py.typed
new file mode 100644
index 0000000..e69de29
diff --git a/CHANGELOG.md b/CHANGELOG.md
index 9b32a86..a26b6df 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -6,6 +6,58 @@
 
 
 
+## v2026.6.8
+
+This release ships inline type information (PEP 561), consolidates the continuous
+integration workflows, completes the repository rename to `brainx`, and refreshes
+the pinned component versions.
+
+- **Package Dependencies:**
+  - [`jax<=0.10.1,>=0.6.0`](https://pypi.org/project/jax/) ↗️ (raised upper bound)
+  - [`brainpy==2.7.8`](https://pypi.org/project/brainpy/2.7.8/) ↗️
+  - [`brainunit==0.3.2`](https://pypi.org/project/brainunit/0.3.2/) ↗️
+  - [`brainstate==0.4.0`](https://pypi.org/project/brainstate/0.4.0/) ↗️
+  - [`brainevent==0.1.0`](https://pypi.org/project/brainevent/0.1.0/) ↗️
+  - [`braintools==0.1.9`](https://pypi.org/project/braintools/0.1.9/) ↗️
+  - [`braintrace==0.2.0`](https://pypi.org/project/braintrace/0.2.0/) ↗️
+  - [`braincell==0.0.8`](https://pypi.org/project/braincell/0.0.8/)
+  - [`brainpy-state==0.0.4`](https://pypi.org/project/brainpy-state/0.0.4/)
+  - [`brainmass==0.0.5`](https://pypi.org/project/brainmass/0.0.5/)
+  - [`pinnx==0.0.3`](https://pypi.org/project/pinnx/0.0.3/)
+
+- **Typing:**
+  - Added a [PEP 561](https://peps.python.org/pep-0561/) `py.typed` marker so that
+    downstream type checkers (mypy, pyright) treat `BrainX` as a typed package
+  - Declared `py.typed` as package data in `pyproject.toml` so it ships in the wheel
+
+- **Continuous Integration:**
+  - Merged the push/pull-request workflow and the scheduled workflow into a single
+    `CI.yml`
+  - The cross-platform test suite (Linux, macOS, Windows) runs on push, pull
+    request, and manual dispatch
+  - A JAX-version compatibility matrix (`0.7.1`, `0.8.0`, `0.9.0`, and latest) runs
+    on a daily schedule and on manual dispatch
+
+- **Repository:**
+  - Renamed the GitHub repository from `brain-modeling-ecosystem` to `brainx`;
+    updated all source, documentation, and packaging URLs accordingly
+
+- **Documentation:**
+  - Corrected the "Open in Colab/Kaggle" badges in every example notebook to target
+    their actual paths on the `main` branch
+  - Replaced the logo and favicon with hosted WebP assets and removed the bundled
+    3.5 MB `plotly.js`
+  - Removed unused static assets (legacy PWA manifest, service worker, and stale
+    images)
+
+- **README:**
+  - Fixed the BrainTrace link, which previously pointed at the renamed `brainscale`
+    repository
+  - Added PINNx to the list of ecosystem components
+  - Replaced the broken Read the Docs badge with Documentation and License badges
+
+
+
 ## v2026.3.12
 
 This release updates package dependencies and drops Python 3.10 support.
diff --git a/README.md b/README.md
index 6d98936..ca89bfe 100644
--- a/README.md
+++ b/README.md
@@ -1,17 +1,18 @@
 # Brain Simulation Ecosystem (BrainX)
 
 [![PyPI version](https://img.shields.io/pypi/v/brainx)](https://pypi.org/project/brainx/)
-![Read the Docs](https://img.shields.io/readthedocs/brainmodeling)
-[![Continuous Integration](https://github.com/chaobrain/brain-modeling-ecosystem/actions/workflows/CI.yml/badge.svg)](https://github.com/chaobrain/brain-modeling-ecosystem/actions/workflows/CI.yml)
+[![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://github.com/chaobrain/brainx/blob/main/LICENSE)
+[![Documentation](https://img.shields.io/badge/docs-brainx.chaobrain.com-blue)](https://brainx.chaobrain.com)
+[![Continuous Integration](https://github.com/chaobrain/brainx/actions/workflows/CI.yml/badge.svg)](https://github.com/chaobrain/brainx/actions/workflows/CI.yml)
 
 
 <p align="center">
-  	<img alt="Header image of Brain Modeling Ecosystem." src="https://raw.githubusercontent.com/chaobrain/brain-modeling-ecosystem/main/docs/_static/bdp-ecosystem.png" width=50%>
+  	<img alt="Header image of Brain Modeling Ecosystem." src="https://brainx.chaobrain.com/images/brainx-ecosystem.webp" width=50%>
 </p> 
 
 ## Overview
 
-The BrainX ecosystem provides comprehensive framework for brain simulation and modeling.
+The BrainX ecosystem provides a comprehensive framework for brain simulation and modeling.
 It provides tools and libraries for researchers to model, simulate, train, and analyze neural systems at different
 scales.
 
@@ -36,12 +37,14 @@ scales.
 
 - [BrainEvent](https://github.com/chaobrain/brainevent): Enabling event-driven computations in brain dynamics.
 
-- [BrainTrace](https://github.com/chaobrain/brainscale): Enabling scalable online learning for brain dynamics: $O(N)$
-  complexity for SNNs, and $O(N^2)$ for RNN computations.
+- [BrainTrace](https://github.com/chaobrain/braintrace): Eligibility trace-based online learning for brain dynamics:
+  $O(N)$ complexity for SNNs and $O(N^2)$ for RNN computations.
 
 - [BrainTools](https://github.com/chaobrain/braintools): Commonly used tools for brain dynamics programming, for example
   checkpointing.
 
+- [PINNx](https://github.com/chaobrain/pinnx): Physics-informed neural networks for scientific machine learning in JAX.
+
 - More components may be added in the future.
 
 ## Installation
@@ -78,8 +81,8 @@ pip install BrainX[tpu] -U
 For development, you might want to clone the repository and install it in editable mode:
 
 ```bash
-git clone https://github.com/chaobrain/brain-modeling-ecosystem.git
-cd brain-modeling-ecosystem
+git clone https://github.com/chaobrain/brainx.git
+cd brainx
 pip install -e .
 ```
 
@@ -100,15 +103,15 @@ This project is licensed under the Apache License, Version 2.0. See the [LICENSE
 ## Citation
 
 If you use the BrainX Ecosystem in your research, please cite it appropriately. Refer to
-the [citation guide](https://brainx.chaobrain.com/citation.html) on our documentation portal.
+the [citation guide](https://brainx.chaobrain.com/research/papers-about-brainx/) on our documentation portal.
 
 ## Support
 
 If you have questions, encounter issues, or need support, please:
 
 * Check the [documentation](https://brainx.chaobrain.com).
-* Search the [existing issues](https://github.com/chaobrain/brain-modeling-ecosystem/issues).
-* [Open a new issue](https://github.com/chaobrain/brain-modeling-ecosystem/issues/new/choose) if your problem is not
+* Search the [existing issues](https://github.com/chaobrain/brainx/issues).
+* [Open a new issue](https://github.com/chaobrain/brainx/issues/new/choose) if your problem is not
   addressed.
 * Contact us via email: `chao.brain@qq.com`.
 
diff --git a/SECURITY.md b/SECURITY.md
index 3bc6614..5d3c6e5 100644
--- a/SECURITY.md
+++ b/SECURITY.md
@@ -2,7 +2,7 @@
 
 ## Reporting a bug in Brain Modeling Ecosystem
 
-Report security bugs in BrainPy via [Github Issue](https://github.com/chaobrain/brainmodeling/issues).
+Report security bugs in BrainPy via [Github Issue](https://github.com/chaobrain/brainx/issues).
 
 Normally your report will be acknowledged within 5 days, and you'll receive a more detailed response 
 to your report within 10 days indicating the next steps in handling your submission. These timelines 
diff --git a/docs/_static/bdp-ecosystem.png b/docs/_static/bdp-ecosystem.png
deleted file mode 100644
index 8dfcf64..0000000
Binary files a/docs/_static/bdp-ecosystem.png and /dev/null differ
diff --git a/docs/_static/book.png b/docs/_static/book.png
deleted file mode 100644
index ef69a5e..0000000
Binary files a/docs/_static/book.png and /dev/null differ
diff --git a/docs/_static/js/service-worker.js b/docs/_static/js/service-worker.js
deleted file mode 100644
index 2e43016..0000000
--- a/docs/_static/js/service-worker.js
+++ /dev/null
@@ -1,49 +0,0 @@
-const CACHE_NAME = 'brain-ecosystem-v1';
-const urlsToCache = [
-  './ecosystem.html',
-  './_static/bdp-ecosystem.png',
-  './_static/brainmass.png',
-  './_static/brainevent.png'
-];
-
-// Install event - cache resources
-self.addEventListener('install', event => {
-  event.waitUntil(
-    caches.open(CACHE_NAME)
-      .then(cache => {
-        console.log('Opened cache');
-        return cache.addAll(urlsToCache);
-      })
-  );
-});
-
-// Fetch event - serve from cache, fallback to network
-self.addEventListener('fetch', event => {
-  event.respondWith(
-    caches.match(event.request)
-      .then(response => {
-        // Cache hit - return response
-        if (response) {
-          return response;
-        }
-        return fetch(event.request);
-      }
-    )
-  );
-});
-
-// Activate event - clean up old caches
-self.addEventListener('activate', event => {
-  const cacheWhitelist = [CACHE_NAME];
-  event.waitUntil(
-    caches.keys().then(cacheNames => {
-      return Promise.all(
-        cacheNames.map(cacheName => {
-          if (cacheWhitelist.indexOf(cacheName) === -1) {
-            return caches.delete(cacheName);
-          }
-        })
-      );
-    })
-  );
-});
diff --git a/docs/_static/manifest.json b/docs/_static/manifest.json
deleted file mode 100644
index e44f0ca..0000000
--- a/docs/_static/manifest.json
+++ /dev/null
@@ -1,22 +0,0 @@
-{
-  "name": "Brain Simulation Ecosystem",
-  "short_name": "Brain Ecosystem",
-  "description": "Differentiable, flexible, and extensible ecosystem for large-scale brain simulation",
-  "start_url": "./ecosystem.html",
-  "display": "standalone",
-  "background_color": "#f8f9fa",
-  "theme_color": "#667eea",
-  "orientation": "portrait-primary",
-  "icons": [
-    {
-      "src": "./_static/bdp-ecosystem.png",
-      "sizes": "192x192",
-      "type": "image/png"
-    },
-    {
-      "src": "./_static/bdp-ecosystem.png",
-      "sizes": "512x512",
-      "type": "image/png"
-    }
-  ]
-}
diff --git a/docs/basics/brainstate_alignpre_aignpost.ipynb b/docs/basics/brainstate_alignpre_aignpost.ipynb
index 660e74c..bd0379a 100644
--- a/docs/basics/brainstate_alignpre_aignpost.ipynb
+++ b/docs/basics/brainstate_alignpre_aignpost.ipynb
@@ -8,8 +8,8 @@
       "source": [
         "# AlignPre and AlignPost projections in ``brainstate``\n",
         "\n",
-        "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainstate_alignpre_aignpost.ipynb)\n",
-        "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainstate_alignpre_aignpost.ipynb)"
+        "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/basics/brainstate_alignpre_aignpost.ipynb)\n",
+        "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/basics/brainstate_alignpre_aignpost.ipynb)"
       ],
       "id": "899460675191986d"
     }
diff --git a/docs/basics/brainstate_transformations.ipynb b/docs/basics/brainstate_transformations.ipynb
index eeff922..cbf6fb4 100644
--- a/docs/basics/brainstate_transformations.ipynb
+++ b/docs/basics/brainstate_transformations.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# State-based transformations with ``brainstate``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/basics/brainstate_transformations.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/basics/brainstate_transformations.ipynb)\n",
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/basics/brainstate_transformations.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/basics/brainstate_transformations.ipynb)\n",
     "\n",
     "Welcome! This tutorial introduces **state-based transformations** in `brainstate`, powerful tools that enable efficient simulation and compilation of brain models. You'll learn:\n",
     "\n",
diff --git a/docs/basics/brainunit_unit_aware_computations.ipynb b/docs/basics/brainunit_unit_aware_computations.ipynb
index 12048c0..a31a9cb 100644
--- a/docs/basics/brainunit_unit_aware_computations.ipynb
+++ b/docs/basics/brainunit_unit_aware_computations.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# Unit-aware computations with ``brainunit``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/basics/brainunit_unit_aware_computations.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/basics/brainunit_unit_aware_computations.ipynb)\n",
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/basics/brainunit_unit_aware_computations.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/basics/brainunit_unit_aware_computations.ipynb)\n",
     "\n",
     "Welcome! This tutorial introduces ``brainunit``, the physical units and unit-aware mathematical system in the BrainX ecosystem."
    ]
diff --git a/docs/conf.py b/docs/conf.py
index ba64b11..3b1f157 100644
--- a/docs/conf.py
+++ b/docs/conf.py
@@ -1,164 +1,164 @@
-# Copyright 2024 Brain Simulation Ecosystem Limited. All Rights Reserved.
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-#     http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-# ==============================================================================
-
-import os
-import sys
-import shutil
-
-sys.path.insert(0, os.path.abspath('../'))
-sys.path.insert(0, os.path.abspath('./'))
-
-shutil.copy('../CHANGELOG.md', './CHANGELOG.md')
-
-# Configuration file for the Sphinx documentation builder.
-#
-# This file only contains a selection of the most common options. For a full
-# a_list see the documentation:
-# https://www.sphinx-doc.org/en/master/usage/configuration.html
-
-# -- Path setup --------------------------------------------------------------
-
-# If extensions (or modules to document with autodoc) are in another directory,
-# add these directories to sys.path here. If the directory is relative to the
-# documentation root, use os.path.abspath to make it absolute, like shown here.
-#
-
-# -- Project information -----------------------------------------------------
-
-project = 'BrainX Ecosystem'
-copyright = '2024, BrainX Ecosystem'
-author = 'BrainX Developers'
-
-import BrainX
-
-# The full version, including alpha/beta/rc tags
-release = BrainX.__version__
-
-from fix_ipython import fix_ipython2_lexer_in_notebooks
-
-fix_ipython2_lexer_in_notebooks(os.path.dirname(os.path.abspath(__file__)))
-
-# -- General configuration ---------------------------------------------------
-
-# Add any Sphinx extension module names here, as strings. They can be
-# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
-# ones.
-extensions = [
-    'sphinx.ext.autodoc',
-    'sphinx.ext.autosummary',
-    'sphinx.ext.intersphinx',
-    'sphinx.ext.mathjax',
-    'sphinx.ext.napoleon',
-    'sphinx.ext.viewcode',
-    'sphinx_autodoc_typehints',
-    'myst_nb',
-    'sphinx_thebe',
-    'sphinx_design',
-    'sphinx_copybutton',
-    'nbsphinx',
-    'brainx_sphinx_header',
-]
-# Add any paths that contain custom static files (such as style sheets) here,
-# relative to this directory. They are copied after the builtin static files,
-# so a file named "default.css" will overwrite the builtin "default.css".
-# Add any paths that contain templates here, relative to this directory.
-templates_path = ['_templates']
-source_suffix = ['.rst', '.ipynb', '.md']
-
-# source_suffix = '.rst'
-autosummary_generate = True
-
-# The master toctree document.
-master_doc = 'index'
-
-intersphinx_mapping = {
-    "python": ("https://docs.python.org/3.13", None),
-    "sphinx": ("https://www.sphinx-doc.org/en/master", None),
-}
-nitpick_ignore = [
-    ("py:class", "docutils.nodes.document"),
-    ("py:class", "docutils.parsers.rst.directives.body.Sidebar"),
-]
-
-suppress_warnings = [
-    "myst.domains",
-    "ref.ref",
-]
-
-numfig = True
-
-myst_enable_extensions = [
-    "dollarmath",
-    "amsmath",
-    "deflist",
-    "colon_fence",
-]
-# List of patterns, relative to source directory, that match files and
-# directories to ignore when looking for source files.
-# This pattern also affects html_static_path and html_extra_path.
-exclude_patterns = [
-    '_build',
-    'Thumbs.db',
-    '.DS_Store',
-    '_build',
-    '**.ipynb_checkpoints',
-    'jupyter_execute/**',  # 排除 jupyter_execute 目录
-]
-
-html_theme = "sphinx_book_theme"
-html_logo = "https://brainx.chaobrain.com/images/brainx-ecosystem.webp"
-html_title = "Brain Modeling Ecosystem"
-html_copy_source = True
-html_sourcelink_suffix = ""
-html_favicon = "https://brainx.chaobrain.com/images/brainx-ecosystem.webp"
-html_last_updated_fmt = ""
-html_baseurl = "https://brainx.chaobrain.com/summ/"
-
-# Add any paths that contain custom static files (such as style sheets) here,
-# relative to this directory. They are copied after the builtin static files,
-# so a file named "default.css" will overwrite the builtin "default.css".
-html_static_path = ["_static"]
-
-# The BrainX brand header is provided by the `brainx_sphinx_header` extension
-# (added to `extensions` above). It fetches header.html/css from
-# https://brainx.chaobrain.com/shared-header, emits them under _static/, and
-# registers them automatically. Override defaults here if needed:
-#   brainx_header_url     = "https://brainx.chaobrain.com/shared-header"
-#   brainx_header_ttl     = 3600
-#   brainx_header_offline = False
-#   brainx_header_local   = None
-
-
-# jupyter_execute_notebooks = "off"
-nb_execution_mode = "off"
-
-thebe_config = {
-    "repository_url": "https://github.com/binder-examples/jupyter-stacks-datascience",
-    "repository_branch": "master",
-}
-
-html_theme_options = {
-    'show_toc_level': 2,
-    'repository_url': 'https://github.com/chaobrain/brain-modeling-ecosystem',  # 添加GitHub链接
-    'use_repository_button': True,  # 显示GitHub按钮
-}
-
-# -- Options for myst ----------------------------------------------
-# Notebook cell execution timeout; defaults to 30.
-nb_execution_timeout = 200
-
-autodoc_default_options = {
-    'exclude-members': '....,default_rng',
-}
+# Copyright 2024 Brain Simulation Ecosystem Limited. All Rights Reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+# ==============================================================================
+
+import os
+import sys
+import shutil
+
+sys.path.insert(0, os.path.abspath('../'))
+sys.path.insert(0, os.path.abspath('./'))
+
+shutil.copy('../CHANGELOG.md', './CHANGELOG.md')
+
+# Configuration file for the Sphinx documentation builder.
+#
+# This file only contains a selection of the most common options. For a full
+# a_list see the documentation:
+# https://www.sphinx-doc.org/en/master/usage/configuration.html
+
+# -- Path setup --------------------------------------------------------------
+
+# If extensions (or modules to document with autodoc) are in another directory,
+# add these directories to sys.path here. If the directory is relative to the
+# documentation root, use os.path.abspath to make it absolute, like shown here.
+#
+
+# -- Project information -----------------------------------------------------
+
+project = 'BrainX Ecosystem'
+copyright = '2024, BrainX Ecosystem'
+author = 'BrainX Developers'
+
+import BrainX
+
+# The full version, including alpha/beta/rc tags
+release = BrainX.__version__
+
+from fix_ipython import fix_ipython2_lexer_in_notebooks
+
+fix_ipython2_lexer_in_notebooks(os.path.dirname(os.path.abspath(__file__)))
+
+# -- General configuration ---------------------------------------------------
+
+# Add any Sphinx extension module names here, as strings. They can be
+# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
+# ones.
+extensions = [
+    'sphinx.ext.autodoc',
+    'sphinx.ext.autosummary',
+    'sphinx.ext.intersphinx',
+    'sphinx.ext.mathjax',
+    'sphinx.ext.napoleon',
+    'sphinx.ext.viewcode',
+    'sphinx_autodoc_typehints',
+    'myst_nb',
+    'sphinx_thebe',
+    'sphinx_design',
+    'sphinx_copybutton',
+    'nbsphinx',
+    'brainx_sphinx_header',
+]
+# Add any paths that contain custom static files (such as style sheets) here,
+# relative to this directory. They are copied after the builtin static files,
+# so a file named "default.css" will overwrite the builtin "default.css".
+# Add any paths that contain templates here, relative to this directory.
+templates_path = ['_templates']
+source_suffix = ['.rst', '.ipynb', '.md']
+
+# source_suffix = '.rst'
+autosummary_generate = True
+
+# The master toctree document.
+master_doc = 'index'
+
+intersphinx_mapping = {
+    "python": ("https://docs.python.org/3.13", None),
+    "sphinx": ("https://www.sphinx-doc.org/en/master", None),
+}
+nitpick_ignore = [
+    ("py:class", "docutils.nodes.document"),
+    ("py:class", "docutils.parsers.rst.directives.body.Sidebar"),
+]
+
+suppress_warnings = [
+    "myst.domains",
+    "ref.ref",
+]
+
+numfig = True
+
+myst_enable_extensions = [
+    "dollarmath",
+    "amsmath",
+    "deflist",
+    "colon_fence",
+]
+# List of patterns, relative to source directory, that match files and
+# directories to ignore when looking for source files.
+# This pattern also affects html_static_path and html_extra_path.
+exclude_patterns = [
+    '_build',
+    'Thumbs.db',
+    '.DS_Store',
+    '_build',
+    '**.ipynb_checkpoints',
+    'jupyter_execute/**',  # 排除 jupyter_execute 目录
+]
+
+html_theme = "sphinx_book_theme"
+html_logo = "https://brainx.chaobrain.com/images/brainx-ecosystem.webp"
+html_title = "Brain Modeling Ecosystem"
+html_copy_source = True
+html_sourcelink_suffix = ""
+html_favicon = "https://brainx.chaobrain.com/images/brainx-ecosystem.webp"
+html_last_updated_fmt = ""
+html_baseurl = "https://brainx.chaobrain.com/summ/"
+
+# Add any paths that contain custom static files (such as style sheets) here,
+# relative to this directory. They are copied after the builtin static files,
+# so a file named "default.css" will overwrite the builtin "default.css".
+html_static_path = ["_static"]
+
+# The BrainX brand header is provided by the `brainx_sphinx_header` extension
+# (added to `extensions` above). It fetches header.html/css from
+# https://brainx.chaobrain.com/shared-header, emits them under _static/, and
+# registers them automatically. Override defaults here if needed:
+#   brainx_header_url     = "https://brainx.chaobrain.com/shared-header"
+#   brainx_header_ttl     = 3600
+#   brainx_header_offline = False
+#   brainx_header_local   = None
+
+
+# jupyter_execute_notebooks = "off"
+nb_execution_mode = "off"
+
+thebe_config = {
+    "repository_url": "https://github.com/binder-examples/jupyter-stacks-datascience",
+    "repository_branch": "master",
+}
+
+html_theme_options = {
+    'show_toc_level': 2,
+    'repository_url': 'https://github.com/chaobrain/brainx',  # 添加GitHub链接
+    'use_repository_button': True,  # 显示GitHub按钮
+}
+
+# -- Options for myst ----------------------------------------------
+# Notebook cell execution timeout; defaults to 30.
+nb_execution_timeout = 200
+
+autodoc_default_options = {
+    'exclude-members': '....,default_rng',
+}
diff --git a/docs/getting_started/braincell_HH_EI_network-zh.ipynb b/docs/getting_started/braincell_HH_EI_network-zh.ipynb
index 49afc68..fe09ecc 100644
--- a/docs/getting_started/braincell_HH_EI_network-zh.ipynb
+++ b/docs/getting_started/braincell_HH_EI_network-zh.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# 使用 `braincell` 对 Hodgkin-Huxley 型 E-I 网络进行仿真\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_EI_network-zh.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_EI_network-zh.ipynb)"
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/getting_started/braincell_HH_EI_network-zh.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/getting_started/braincell_HH_EI_network-zh.ipynb)"
    ]
   },
   {
diff --git a/docs/getting_started/braincell_HH_EI_network.ipynb b/docs/getting_started/braincell_HH_EI_network.ipynb
index 49c9642..b0daff1 100644
--- a/docs/getting_started/braincell_HH_EI_network.ipynb
+++ b/docs/getting_started/braincell_HH_EI_network.ipynb
@@ -9,8 +9,8 @@
    "source": [
     "# Simulating excitatory-inhibitory Hodgkin-Huxley neuron networks using ``braincell``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_EI_network.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_EI_network.ipynb)"
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/getting_started/braincell_HH_EI_network.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/getting_started/braincell_HH_EI_network.ipynb)"
    ]
   },
   {
diff --git a/docs/getting_started/braincell_HH_neuron-zh.ipynb b/docs/getting_started/braincell_HH_neuron-zh.ipynb
index 53dfb4d..90b86ce 100644
--- a/docs/getting_started/braincell_HH_neuron-zh.ipynb
+++ b/docs/getting_started/braincell_HH_neuron-zh.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# 使用 `braincell` 对 Hodgkin-Huxley 神经元仿真\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_neuron-zh.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_neuron-zh.ipynb)\n",
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/getting_started/braincell_HH_neuron-zh.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/getting_started/braincell_HH_neuron-zh.ipynb)\n",
     "\n",
     "本节介绍使用 `braincell` 对 Hodgkin-Huxley 神经元仿真。"
    ]
diff --git a/docs/getting_started/braincell_HH_neuron.ipynb b/docs/getting_started/braincell_HH_neuron.ipynb
index c8a4fcc..cfccb7c 100644
--- a/docs/getting_started/braincell_HH_neuron.ipynb
+++ b/docs/getting_started/braincell_HH_neuron.ipynb
@@ -9,8 +9,8 @@
    "source": [
     "# Simulating a Hodgkin–Huxley neuron with ``braincell``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_neuron.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_neuron.ipynb)\n",
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/getting_started/braincell_HH_neuron.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/getting_started/braincell_HH_neuron.ipynb)\n",
     "\n",
     "This section introduces how to simulate Hodgkin-Huxley neurons using `braincell`."
    ]
diff --git a/docs/getting_started/braincell_morphological_golgi_cell.ipynb b/docs/getting_started/braincell_morphological_golgi_cell.ipynb
index dcdcf69..7e4e33a 100644
--- a/docs/getting_started/braincell_morphological_golgi_cell.ipynb
+++ b/docs/getting_started/braincell_morphological_golgi_cell.ipynb
@@ -6,8 +6,8 @@
    "source": [
     "# Simulating morphological Golgi cell with ``braincell``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/braincell_morphological_golgi_cell.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/braincell_morphological_golgi_cell.ipynb)"
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/getting_started/braincell_morphological_golgi_cell.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/getting_started/braincell_morphological_golgi_cell.ipynb)"
    ]
   },
   {
diff --git a/docs/getting_started/brainmass_Modeling_MEG_data_zh.ipynb b/docs/getting_started/brainmass_Modeling_MEG_data_zh.ipynb
index 8e05ca0..3fed193 100644
--- a/docs/getting_started/brainmass_Modeling_MEG_data_zh.ipynb
+++ b/docs/getting_started/brainmass_Modeling_MEG_data_zh.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# 使用 ``brainmass`` 进行全脑神经质量模型建模\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainmass_Modeling_MEG_data_zh.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainmass_Modeling_MEG_data_zh.ipynb)"
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/getting_started/brainmass_Modeling_MEG_data_zh.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/getting_started/brainmass_Modeling_MEG_data_zh.ipynb)"
    ]
   },
   {
diff --git a/docs/getting_started/brainmass_jansenrit_node_simulation.ipynb b/docs/getting_started/brainmass_jansenrit_node_simulation.ipynb
index 2eb323c..52dea6d 100644
--- a/docs/getting_started/brainmass_jansenrit_node_simulation.ipynb
+++ b/docs/getting_started/brainmass_jansenrit_node_simulation.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# Simulating Jansen–Rit population dynamics with ``brainmass``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainmass_jansenrit_node_simulation.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainmass_jansenrit_node_simulation.ipynb)\n",
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/getting_started/brainmass_jansenrit_node_simulation.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/getting_started/brainmass_jansenrit_node_simulation.ipynb)\n",
     "\n",
     "We simulate a single Jansen–Rit (JR) neural mass model node under a variety of inputs to illustrate different regimes: baseline alpha-like rhythms, sinusoidal entrainment, spike–wave-like activity, reduced inhibition, and irregular/noisy dynamics.\n",
     "\n",
diff --git a/docs/getting_started/brainpy_EI_spiking_network.ipynb b/docs/getting_started/brainpy_EI_spiking_network.ipynb
index 8057cbe..305513b 100644
--- a/docs/getting_started/brainpy_EI_spiking_network.ipynb
+++ b/docs/getting_started/brainpy_EI_spiking_network.ipynb
@@ -9,8 +9,8 @@
    "source": [
     "# Simulating excitatory-inhibitory spiking networks with ``brainpy``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainpy_EI_spiking_network.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainpy_EI_spiking_network.ipynb)"
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/getting_started/brainpy_EI_spiking_network.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/getting_started/brainpy_EI_spiking_network.ipynb)"
    ]
   },
   {
diff --git a/docs/getting_started/brainstate_LIF_neuron.ipynb b/docs/getting_started/brainstate_LIF_neuron.ipynb
index 027005c..799f229 100644
--- a/docs/getting_started/brainstate_LIF_neuron.ipynb
+++ b/docs/getting_started/brainstate_LIF_neuron.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# Constructing LIF neuron model with ``brainstate``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainstate_LIF_neuron.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainstate_LIF_neuron.ipynb)\n",
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/getting_started/brainstate_LIF_neuron.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/getting_started/brainstate_LIF_neuron.ipynb)\n",
     "\n",
     "Welcome! This beginner-friendly tutorial will guide you through:\n",
     "\n",
diff --git a/docs/install.md b/docs/install.md
index 9bddcc6..7df246a 100644
--- a/docs/install.md
+++ b/docs/install.md
@@ -64,8 +64,8 @@ See the change log for the exact component versions: [docs/CHANGELOG.md](./CHANG
 ## From source (development)
 
 ```bash
-git clone https://github.com/chaobrain/brain-modeling-ecosystem.git
-cd brain-modeling-ecosystem
+git clone https://github.com/chaobrain/brainx.git
+cd brainx
 python -m pip install -e .
 ```
 
diff --git a/docs/point_neuron_examples/braincell_HH_thalamus_oscillations-zh.ipynb b/docs/point_neuron_examples/braincell_HH_thalamus_oscillations-zh.ipynb
index 43a21b6..5b36bcc 100644
--- a/docs/point_neuron_examples/braincell_HH_thalamus_oscillations-zh.ipynb
+++ b/docs/point_neuron_examples/braincell_HH_thalamus_oscillations-zh.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# 使用 `braincell` 对 Hodgkin-Huxley 型丘脑网络进行仿真\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_thalamus_oscillations.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_thalamus_oscillations.ipynb)"
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/point_neuron_examples/braincell_HH_thalamus_oscillations-zh.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/point_neuron_examples/braincell_HH_thalamus_oscillations-zh.ipynb)"
    ]
   },
   {
diff --git a/docs/point_neuron_examples/braincell_HH_thalamus_oscillations.ipynb b/docs/point_neuron_examples/braincell_HH_thalamus_oscillations.ipynb
index 6efc167..b8acdb0 100644
--- a/docs/point_neuron_examples/braincell_HH_thalamus_oscillations.ipynb
+++ b/docs/point_neuron_examples/braincell_HH_thalamus_oscillations.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# Simulating a Hodgkin-Huxley Type Thalamic Network with `braincell`\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_thalamus_oscillations.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/develop/docs/braincell_HH_thalamus_oscillations.ipynb)"
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/point_neuron_examples/braincell_HH_thalamus_oscillations.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/point_neuron_examples/braincell_HH_thalamus_oscillations.ipynb)"
    ]
   },
   {
diff --git a/docs/point_neuron_examples/brainpy_spiking_gamma_oscillations.ipynb b/docs/point_neuron_examples/brainpy_spiking_gamma_oscillations.ipynb
index b3af37f..0c1d264 100644
--- a/docs/point_neuron_examples/brainpy_spiking_gamma_oscillations.ipynb
+++ b/docs/point_neuron_examples/brainpy_spiking_gamma_oscillations.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# Simulating asynchronous or Gamma oscillations using AdEx neurons in ``brainpy.state``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainpy_spiking_gamma_oscillations.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainpy_spiking_gamma_oscillations.ipynb)"
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/point_neuron_examples/brainpy_spiking_gamma_oscillations.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/point_neuron_examples/brainpy_spiking_gamma_oscillations.ipynb)"
    ]
   },
   {
diff --git a/docs/point_neuron_examples/brainstate_drosophila_wholebrain_simulation.ipynb b/docs/point_neuron_examples/brainstate_drosophila_wholebrain_simulation.ipynb
index 0309d1a..3b17686 100644
--- a/docs/point_neuron_examples/brainstate_drosophila_wholebrain_simulation.ipynb
+++ b/docs/point_neuron_examples/brainstate_drosophila_wholebrain_simulation.ipynb
@@ -7,8 +7,8 @@
    "source": [
     "# Simulating whole-brain Drosophila spiking model with ``brainstate``\n",
     "\n",
-    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainstate_drosophila_wholebrain_simulation.ipynb)\n",
-    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brain-modeling-ecosystem/blob/main/docs/brainstate_drosophila_wholebrain_simulation.ipynb)"
+    "[![Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/chaobrain/brainx/blob/main/docs/point_neuron_examples/brainstate_drosophila_wholebrain_simulation.ipynb)\n",
+    "[![Open in Kaggle](https://kaggle.com/static/images/open-in-kaggle.svg)](https://kaggle.com/kernels/welcome?src=https://github.com/chaobrain/brainx/blob/main/docs/point_neuron_examples/brainstate_drosophila_wholebrain_simulation.ipynb)"
    ]
   },
   {
diff --git a/pyproject.toml b/pyproject.toml
index 262046f..dd08df6 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -53,15 +53,15 @@ dynamic = [
 
 [project.urls]
 Documentation = "https://brainx.chaobrain.com/"
-Homepage = "https://github.com/chaobrain/brain-modeling-ecosystem"
-"Source Code" = "https://github.com/chaobrain/brain-modeling-ecosystem"
-"Bug Tracker" = "https://github.com/chaobrain/brain-modeling-ecosystem/issues"
+Homepage = "https://github.com/chaobrain/brainx"
+"Source Code" = "https://github.com/chaobrain/brainx"
+"Bug Tracker" = "https://github.com/chaobrain/brainx/issues"
 
 
 [project.optional-dependencies]
 cpu = ["jax[cpu]", "numba"]
-cuda12 = ["jax[cuda12]", "ninja"]
-cuda13 = ["jax[cuda13]", "ninja"]
+cuda12 = ["jax[cuda12]"]
+cuda13 = ["jax[cuda13]"]
 tpu = ["jax[tpu]"]
 
 
@@ -80,6 +80,10 @@ exclude = [
 ]
 
 
+[tool.setuptools.package-data]
+BrainX = ["py.typed"]
+
+
 [tool.setuptools.dynamic]
 version = { attr = "BrainX.__version__" }
 dependencies = { file = ["requirements.txt"] }
diff --git a/requirements.txt b/requirements.txt
index de154ba..d5bb2da 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,7 +1,7 @@
 # infrastructure packages
-brainunit==0.3.1
-brainevent==0.0.7
-brainstate==0.3.0
+brainunit==0.3.2
+brainevent==0.1.0
+brainstate==0.4.0
 braintools==0.1.9
 braintrace==0.2.0
 
@@ -14,6 +14,6 @@ pinnx==0.0.3
 
 # dependencies
 numpy>=2.4.4
-jax<=0.9.1,>=0.6.0
+jax<=0.10.1,>=0.7.1
 msgpack>=1.1.2
 matplotlib