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pysam-0.8.3

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@AndreasHeger AndreasHeger released this 29 Apr 09:54
· 1718 commits to master since this release

This is a minor bugfix/feature release
tying off a few things in 0.8.2. These are:

  • samtools command now accept the "catch_stdout" option.
  • get_aligned_pairs now works for soft-clipped reads.
  • query_position is now None when a PileupRead is not aligned
    to a particular position.
  • AlignedSegments are now comparable and hashable.