diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index f59006b..cca0b46 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -7,16 +7,16 @@ default_stages:
 minimum_pre_commit_version: 2.16.0
 repos:
   - repo: https://github.com/biomejs/pre-commit
-    rev: v2.4.15
+    rev: v2.4.16
     hooks:
       - id: biome-format
         exclude: ^\.cruft\.json$ # inconsistent indentation with cruft - file never to be modified manually.
   - repo: https://github.com/tox-dev/pyproject-fmt
-    rev: v2.21.2
+    rev: v2.23.0
     hooks:
       - id: pyproject-fmt
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.15.13
+    rev: v0.15.15
     hooks:
       - id: ruff-check
         types_or: [python, pyi, jupyter]
diff --git a/pyproject.toml b/pyproject.toml
index 13a3b12..266a85a 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -79,12 +79,13 @@ urls.Homepage = "https://github.com/quadbio/cellmapper"
 urls.Source = "https://github.com/quadbio/cellmapper"
 
 [tool.hatch]
+version.source = "vcs"
 envs.default.installer = "uv"
 envs.default.features = [ "dev" ]
 envs.docs.features = [ "doc" ]
 envs.docs.scripts.build = "sphinx-build -M html docs docs/_build {args}"
-envs.docs.scripts.open = "python -m webbrowser -t docs/_build/html/index.html"
 envs.docs.scripts.clean = "git clean -fdX -- {args:docs}"
+envs.docs.scripts.open = "python -m webbrowser -t docs/_build/html/index.html"
 envs.hatch-test.features = [ "dev", "test" ]
 envs.hatch-test.matrix = [
   # Test the lowest and highest supported Python versions with normal deps
@@ -95,9 +96,8 @@ envs.hatch-test.matrix = [
 # If the matrix variable `deps` is set to "pre",
 # set the environment variable `UV_PRERELEASE` to "allow".
 envs.hatch-test.overrides.matrix.deps.env-vars = [
-  { key = "UV_PRERELEASE", value = "allow", if = [ "pre" ] },
+  { value = "allow", key = "UV_PRERELEASE", if = [ "pre" ] },
 ]
-version.source = "vcs"
 
 [tool.ruff]
 line-length = 120
@@ -138,11 +138,11 @@ lint.per-file-ignores."tests/*" = [ "D" ]
 lint.pydocstyle.convention = "numpy"
 
 [tool.pytest]
-testpaths = [ "tests" ]
-strict = true
 addopts = [
   "--import-mode=importlib", # allow using test files with same name
 ]
+strict = true
+testpaths = [ "tests" ]
 
 [tool.coverage]
 run.omit = [