Skip to content

Commit cfa9887

Browse files
Added more complex tissue detection method for complexer tissues (#1074)
* added weka-like method * upped logreg steps * added warning when invalid corner params for weka method * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * added tests * added border arg * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * simplified * images from runner * reviewer feedback * added more tests * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * images from runner --------- Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
1 parent 91dd574 commit cfa9887

12 files changed

+646
-40
lines changed

src/squidpy/experimental/im/__init__.py

Lines changed: 2 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -3,13 +3,15 @@
33
from ._detect_tissue import (
44
BackgroundDetectionParams,
55
FelzenszwalbParams,
6+
WekaParams,
67
detect_tissue,
78
)
89
from ._make_tiles import make_tiles, make_tiles_from_spots
910

1011
__all__ = [
1112
"BackgroundDetectionParams",
1213
"FelzenszwalbParams",
14+
"WekaParams",
1315
"detect_tissue",
1416
"make_tiles",
1517
"make_tiles_from_spots",

0 commit comments

Comments
 (0)