Jupyter Online Install Issue

[michaelpev]

Hi there, I'm having an issue installing the ADRpy package on Jupyter.org, for a Notebook that has previously run for several months without issue. The error I'm getting is:

ValueError: Requested 'pygments>=2.17', but pygments==2.16.1 is already installed

Full output below:

---

ValueError Traceback (most recent call last)
Cell In[1], line 1
----> 1 await import("piplite").install(**{'requirements': ['ADRpy']})

File /lib/python3.11/site-packages/piplite/piplite.py:117, in _install(requirements, keep_going, deps, credentials, pre, index_urls, verbose)
115 """Invoke micropip.install with a patch to get data from local indexes"""
116 with patch("micropip.package_index.query_package", _query_package):
--> 117 return await micropip.install(
118 requirements=requirements,
119 keep_going=keep_going,
120 deps=deps,
121 credentials=credentials,
122 pre=pre,
123 index_urls=index_urls,
124 verbose=verbose,
125 )

File /lib/python3.11/site-packages/micropip/_commands/install.py:142, in install(requirements, keep_going, deps, credentials, pre, index_urls, verbose)
130 index_urls = package_index.INDEX_URLS[:]
132 transaction = Transaction(
133 ctx=ctx,
134 ctx_extras=[],
(...)
140 index_urls=index_urls,
141 )
--> 142 await transaction.gather_requirements(requirements)
144 if transaction.failed:
145 failed_requirements = ", ".join([f"'{req}'" for req in transaction.failed])

File /lib/python3.11/site-packages/micropip/transaction.py:204, in Transaction.gather_requirements(self, requirements)
201 for requirement in requirements:
202 requirement_promises.append(self.add_requirement(requirement))
--> 204 await asyncio.gather(*requirement_promises)

File /lib/python3.11/site-packages/micropip/transaction.py:211, in Transaction.add_requirement(self, req)
208 return await self.add_requirement_inner(req)
210 if not urlparse(req).path.endswith(".whl"):
--> 211 return await self.add_requirement_inner(Requirement(req))
213 # custom download location
214 wheel = WheelInfo.from_url(req)

File /lib/python3.11/site-packages/micropip/transaction.py:300, in Transaction.add_requirement_inner(self, req)
297 if self._add_requirement_from_pyodide_lock(req):
298 return
--> 300 await self._add_requirement_from_package_index(req)
301 else:
302 try:

File /lib/python3.11/site-packages/micropip/transaction.py:347, in Transaction._add_requirement_from_package_index(self, req)
344 if satisfied:
345 logger.info(f"Requirement already satisfied: {req} ({ver})")
--> 347 await self.add_wheel(wheel, req.extras, specifier=str(req.specifier))

File /lib/python3.11/site-packages/micropip/transaction.py:385, in Transaction.add_wheel(self, wheel, extras, specifier)
383 await wheel.download(self.fetch_kwargs)
384 if self.deps:
--> 385 await self.gather_requirements(wheel.requires(extras))
387 self.wheels.append(wheel)

File /lib/python3.11/site-packages/micropip/transaction.py:204, in Transaction.gather_requirements(self, requirements)
201 for requirement in requirements:
202 requirement_promises.append(self.add_requirement(requirement))
--> 204 await asyncio.gather(*requirement_promises)

File /lib/python3.11/site-packages/micropip/transaction.py:208, in Transaction.add_requirement(self, req)
206 async def add_requirement(self, req: str | Requirement) -> None:
207 if isinstance(req, Requirement):
--> 208 return await self.add_requirement_inner(req)
210 if not urlparse(req).path.endswith(".whl"):
211 return await self.add_requirement_inner(Requirement(req))

File /lib/python3.11/site-packages/micropip/transaction.py:300, in Transaction.add_requirement_inner(self, req)
297 if self._add_requirement_from_pyodide_lock(req):
298 return
--> 300 await self._add_requirement_from_package_index(req)
301 else:
302 try:

File /lib/python3.11/site-packages/micropip/transaction.py:347, in Transaction._add_requirement_from_package_index(self, req)
344 if satisfied:
345 logger.info(f"Requirement already satisfied: {req} ({ver})")
--> 347 await self.add_wheel(wheel, req.extras, specifier=str(req.specifier))

File /lib/python3.11/site-packages/micropip/transaction.py:385, in Transaction.add_wheel(self, wheel, extras, specifier)
383 await wheel.download(self.fetch_kwargs)
384 if self.deps:
--> 385 await self.gather_requirements(wheel.requires(extras))
387 self.wheels.append(wheel)

File /lib/python3.11/site-packages/micropip/transaction.py:204, in Transaction.gather_requirements(self, requirements)
201 for requirement in requirements:
202 requirement_promises.append(self.add_requirement(requirement))
--> 204 await asyncio.gather(*requirement_promises)

File /lib/python3.11/site-packages/micropip/transaction.py:208, in Transaction.add_requirement(self, req)
206 async def add_requirement(self, req: str | Requirement) -> None:
207 if isinstance(req, Requirement):
--> 208 return await self.add_requirement_inner(req)
210 if not urlparse(req).path.endswith(".whl"):
211 return await self.add_requirement_inner(Requirement(req))

File /lib/python3.11/site-packages/micropip/transaction.py:290, in Transaction.add_requirement_inner(self, req)
287 # Is some version of this package is already installed?
288 req.name = canonicalize_name(req.name)
--> 290 satisfied, ver = self.check_version_satisfied(req)
291 if satisfied:
292 logger.info(f"Requirement already satisfied: {req} ({ver})")

File /lib/python3.11/site-packages/micropip/transaction.py:235, in Transaction.check_version_satisfied(self, req)
231 if req.specifier.contains(ver, prereleases=True):
232 # installed version matches, nothing to do
233 return True, ver
--> 235 raise ValueError(
236 f"Requested '{req}', " f"but {req.name}=={ver} is already installed"
237 )

ValueError: Requested 'pygments>=2.17', but pygments==2.16.1 is already installed

[yaseen157]

Hi Michael, apologies for the late response - I don't often find the time to check on how this project is doing.

If this issue is still affecting you, could you try going to the terminal and using the command
py -m pip install --upgrade pygments