Update ci.yml

add debugging of path issue

Author: fmaguire

.github/workflows/ci.yml

@@ -32,6 +32,10 @@ jobs:
           export PATH=$PWD/bin:$PWD/ncbi-blast-2.16.0+/bin:$PATH >> $GITHUB_ENV
       - name: Test
         run: |
+          ls
+          pwd
+          ls bin
+          echo $PATH
           abricate --setupdb
           abricate --version
           abricate --help