Zenodo DOI:

Multiomics image analysis

This repository hosted the scripts described and used in the Open Source Multiomics Analysis Workflow for Comet Images protocol

Please follow the instructions given in this protocol, and in the scripts header, before using them.

Code version

Latest version of the scripts is available under the main branch. The latest versions implement new developments and bug fix, but are not yet released. Thus, the scripts might change a bit before they are effectively released with a new version number.

Stable versions of the scripts are available under the release section. Please find below shortcuts to access a specific version of the scripts

• 0.1.1
• 1.0.0
• 1.0.1

Citing

If you are using those scripts, please cite them by linking it to this GitHub or to the release you used, and feel free to give us a star ⭐️

As this code is neither novel nor entirely original, there is no linked publication, but you can use the following Zenodo entry:

Code authorship

Author: Rémy Dornier (1)

Contributors: Anjalie Schlaeppi (1), Nicolas Chiaruttini (1), Romain Guiet (1)

Affiliations

(1) EPFL BioImaging and Optics Platform (BIOP)

If you use those scripts, you should cite the following protocol:

Dornier, R., Schlaeppi, A., Sordet-Dessimoz, J., Seitz, A., Open Source Multiomics Analysis Workflow for Comet Images. protocols.io, 2026.06, https://dx.doi.org/10.17504/protocols.io.j8nlkzy86l5r/v1