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This repository contains the napari plugin implementing NanoPyx.
NanoPyx is a library specialized in the analysis of light microscopy and super-resolution data. It is a successor to NanoJ, which is a Java library for the analysis of super-resolution microscopy data.
NanoPyx focuses on performance, by heavily exploiting cython aided multiprocessing and simplicity. It implements methods for the bioimage analysis field, with a special emphasis on those developed by the Henriques Laboratory. It will be distributed as a Python Library and also as Codeless Jupyter Notebooks, that can be run locally or on Google Colab, and as a napari plugin.
Currently it implements the following approaches:
- A reimplementation of the NanoJ image registration, SRRF, eSRRF and Super Resolution metrics
- More to come soon™
if you found this work useful, please cite: preprint and
