Fix shell compatibility: remove printf %q from all workflows #27
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printf '%q' is a bash-specific feature but containers use /bin/sh. The filename from Nextflow staging is already safe to use directly. Fixed in: - examples/apol1/apol1-classifier/workflow.nf - examples/brca/brca-classifier/workflow.nf - examples/thalassemia/thalassemia-classifier/workflow.nf - python/src/bioscript/biovault.py (workflow generator template)
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printf '%q' is a bash-specific feature but containers use /bin/sh. The filename from Nextflow staging is already safe to use directly.
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