Feat/master thinker final

.orchestration/active_intents.yaml

@@ -0,0 +1,31 @@
+active_intents:
+    - id: "INT-001"
+        name: "Weather API Implementation"
+        status: "IN_PROGRESS"
+        owned_scope:
+            - "src/weather/**"
+            - "*.js"
+            - "*.ts"
+        constraints:
+            - "Use async/await for all async operations"
+            - "Include error handling with try/catch"
+            - "Return JSON format responses"
+            - "Add input validation"
+        acceptance_criteria:
+            - "Unit tests pass with >80% coverage"
+            - "API returns correct weather data"
+            - "Error cases handled gracefully"
+
+    - id: "INT-002"
+        name: "Authentication Middleware"
+        status: "PLANNED"
+        owned_scope:
+            - "src/auth/**"
+            - "src/middleware/auth.ts"
+        constraints:
+            - "Use JWT tokens"
+            - "Implement rate limiting"
+            - "Log all auth attempts"
+        acceptance_criteria:
+            - "Auth tests pass"
+            - "Security audit passed"

.orchestration/agent_trace.jsonl

@@ -0,0 +1,2 @@
+{"timestamp":"2026-02-21T20:41:12.120Z","intent_id":"INT-001","file_path":"src/core/tools/WriteToFileTool.ts","content_sha256":"5feceb66ffc86f38d952786c6d696c79c2dbc239dd4e91b46729d73a27fb57e9","semantic_change":"EVOLUTION","tool":"write_to_file"}
+{"timestamp":"2026-02-21T20:52:45.918Z","intent_id":"INT-001","file_path":"src/core/assistant-message/presentAssistantMessage.ts","content_sha256":"6b86b273ff34fce19d6b804eff5a3f5747ada4eaa22f1d49c01e52ddb7875b4b","semantic_change":"REFACTOR","tool":"apply_patch"}

.orchestration/intent_map.md

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+# Intent Map
+
+## INT-001: Weather API Implementation
+
+- **Status:** IN_PROGRESS
+- **Files:**
+    - `src/weather/api.js` - Main API endpoints
+    - `src/weather/service.js` - Weather service logic
+    - `src/weather/utils.js` - Helper functions
+- **AST Nodes:**
+    - `WeatherService` class
+    - `getWeatherData()` function
+    - `formatWeatherResponse()` function
+- **Dependencies:** OpenWeatherMap API
+- **Last Updated:** 2026-02-21
+
+## INT-002: Authentication Middleware
+
+- **Status:** PLANNED
+- **Files:**
+    - `src/auth/jwt.js` - JWT handling
+    - `src/middleware/auth.js` - Auth middleware
+    - `src/auth/rate-limit.js` - Rate limiting
+- **AST Nodes:**
+    - `authenticateToken()` middleware
+    - `generateToken()` function
+    - `RateLimiter` class
+- **Dependencies:** jsonwebtoken, express-rate-limit
+- **Last Updated:** 2026-02-21

.vscode/launch.json

@@ -9,6 +9,7 @@
 			"name": "Run Extension",
 			"type": "extensionHost",
 			"request": "launch",
+			"stopOnEntry": false,
 			"runtimeExecutable": "${execPath}",
 			"args": ["--extensionDevelopmentPath=${workspaceFolder}/src"],
 			"sourceMaps": true,

.vscode/mcp.json

@@ -0,0 +1,13 @@
+{
+	"servers": {
+		"tenxfeedbackanalytics": {
+			"url": "https://mcppulse.10academy.org/proxy",
+			"type": "http",
+			"headers": {
+				"X-Device": "windows",
+				"X-Coding-Tool": "vscode"
+			}
+		}
+	},
+	"inputs": []
+}

ARCHITECTURE_NOTES.md

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+# Architecture Notes: Master Thinker Edition
+
+## 1. Data Flow Map (Request-to-Execution)
+
+1. User Input: Received via the React Webview.
+2. Context Assembly: `ClineProvider.ts` calls `src/core/task/Task.ts` to generate the System Prompt.
+3. Decision: The LLM selects a tool. `presentAssistantMessage.ts` orchestrates the tool call.
+4. Execution: `WriteToFileTool.ts` executes the `handle()` method to modify the file system.
+
+## 2. Governance Interception Points
+
+- **Pre-Hook (Phase 1/2):** Located in `WriteToFileTool.ts` inside `handle()`. This will block execution if `.orchestration/active_intents.yaml` does not have an `in-progress` status.
+- **Post-Hook (Phase 3):** Located at the end of `handle()` after a successful write. This will trigger the `agent_trace.jsonl` logger to hash the new content.
+
+## 3. Intent-Code Gap Analysis
+
+Standard Git tracks "What" changed but lacks the "Why." By using a sidecar orchestration layer, we map every Abstract Syntax Tree (AST) change to a specific Requirement ID. This prevents "Context Rot" where agents lose track of architectural constraints during long-running tasks.
+
+# Architectural Design Report
+
+## 1. The Intent-First Protocol (Two-Stage State Machine)
+
+The core of this implementation is a move away from "Vibe Coding" towards a governed, stateful interaction. I have architected a Two-Stage State Machine for every user request:
+
+**Stage 1: The Reasoning Intercept (The Handshake):** The agent is no longer permitted to generate code immediately. It must first analyze the request, identify a valid intent_id from the governance sidecar, and call the select_active_intent tool.
++1
+
+**Stage 2: Contextualized Action:** Only after the "Handshake" is successful and the context is injected can the agent proceed to use destructive tools like write_to_file or execute_command.
++1
+
+## 2. The Deterministic Hook (Gatekeeper Architecture)
+
+To ensure compliance, I implemented a Deterministic Hook System that acts as a strict middleware boundary:
++1
+
+Pre-Hook Implementation: In WriteToFileTool.ts and ExecuteCommandTool.ts, I injected a gatekeeper check at the start of the handle method.
+
+Verification Logic: This hook verifies the presence of a global active intent flag. If the agent attempts a file modification without a validated "checkout," the hook blocks execution and returns a formal governance error: "You must cite a valid active Intent ID".
+
+Fail-Safe: This ensures that the architecture enforces the rules, rather than relying on the LLM's "best effort" to follow instructions.
+
+## 3. Context Engineering (Dynamic Injection vs. Context Rot)
+
+Traditional AI IDEs suffer from "Context Rot" by dumping entire file trees into the prompt. This implementation solves this via Dynamic Context Injection:
++1
+
+**Sidecar Pattern:** All architectural constraints and business intents are stored in .orchestration/active_intents.yaml.
++1
+
+**On-Demand Context:** When select_active_intent is called, the system reads the YAML and constructs a targeted <intent_context> XML block.
+
+**Traceability:** This ensures the agent only operates within its "owned_scope" and respects the "acceptance_criteria" defined in the sidecar, maintaining a high signal-to-noise ratio in the context window.
+
+## 5. Diagrams and Schemas (Required for Interim Submission)
+
+### A. The Two-Stage Handshake (Sequence Diagram)
+
+This diagram illustrates how the Hook Engine intercepts the LLM's request to ensure intent-validation before execution.
+
+```mermaid
+sequenceDiagram
+    participant User
+    participant LLM as Roo Code Agent
+    participant Hook as Hook Engine (Middleware)
+    participant Sidecar as .orchestration/active_intents.yaml
+
+    User->>LLM: "Refactor Auth Logic"
+    Note over LLM: Agent is blocked from writing code
+    LLM->>Hook: call select_active_intent(INT-001)
+    Hook->>Sidecar: Validate Intent ID & Status
+    Sidecar-->>Hook: Return Scope & Constraints
+    Hook-->>LLM: Inject <intent_context> into prompt
+    Note over LLM: Agent now has authorization
+    LLM->>User: "I have loaded intent INT-001. Proceeding..."
+```
+
+### B. Intent Context Schema
+
+```xml
+<intent_context>
+<intent_id>INT-001</intent_id>
+<status>IN PROGRESS</status>
+<owned_scope>
+<file>src/auth/\*\*</file>
+<file>src/middleware/jwt.ts</file>
+</owned_scope>
+<constraints> - Must not use external auth providers - Maintain backward compatibility
+</constraints>
+</intent_context>
+```

SUBMISSION_README.md

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+# Roo Code Master Thinker - Week 1 Final Submission
+
+## Project Overview
+
+A governed AI-native IDE with intent-code traceability, human-in-the-loop security, and concurrent agent safety. This implementation transforms the Roo Code extension from a simple chatbot into a governed orchestration system where every action requires verified intent.
+
+## Implemented Phases
+
+### ✅ Phase 0: Architecture Mapping
+
+- Mapped tool execution flow in `presentAssistantMessage.ts`
+- Located prompt builder in `system.ts`
+- Identified webview communication in `ClineProvider.ts`
+
+### ✅ Phase 1: The Handshake
+
+- `select_active_intent` tool for intent selection
+- `IntentContextLoader` reads YAML and returns XML context
+- System prompt enforces intent-first protocol
+- Gatekeeper blocks writes without valid intent
+
+### ✅ Phase 2: Hook Middleware
+
+- Command classification (SAFE vs DESTRUCTIVE)
+- HITL authorization dialogs for destructive commands
+- Scope enforcement against intent's `owned_scope`
+- Autonomous recovery with structured error responses
+
+### ✅ Phase 3: Traceability
+
+- SHA-256 content hashing for spatial independence
+- Semantic classification (REFACTOR vs EVOLUTION)
+- JSONL trace recording to `agent_trace.jsonl`
+- Links intent IDs to content hashes
+
+### ✅ Phase 4: Concurrency
+
+- Optimistic locking with pre-write hash capture
+- Stale file detection and blocking
+- Clear conflict resolution with re-read guidance