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Add finetuning script for embryo nucleus segmentation#1209

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anwai98 merged 1 commit into
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add-more-example-finetuning-script
May 14, 2026
Merged

Add finetuning script for embryo nucleus segmentation#1209
anwai98 merged 1 commit into
masterfrom
add-more-example-finetuning-script

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@anwai98 anwai98 commented May 14, 2026

Closes #1085

Hi @XiangruiJi,

I added a script here which should help you load data to train micro-sam models. I made some minor changes to your data loading strategy by passing a list of file paths with raw_key set to None.

This should do the trick. I'll go ahead and merge this PR (and subsequently close your issue as the core problem should be addressed)

@anwai98 anwai98 merged commit 91ae63e into master May 14, 2026
@anwai98 anwai98 deleted the add-more-example-finetuning-script branch May 14, 2026 15:15
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How to improve nuclear segmentation and tracking

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