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Releases: databio/pypiper

v0.14.5

22 Sep 18:23
a7ca5ef

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v0.14.5 Release
-removes veracitools dependency

v0.14.4

25 Feb 21:12
7c0e129

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[0.14.4] -- 2025-02-25

Changed

  • Fixed warnings for Python >3.12
  • Updated version of Python to 3.13 in pytests

v0.14.3

02 Oct 18:14
33ad968

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[0.14.3] -- 2024-10-02

Changed

  • bump requirements to require pipestat>=0.11.0

v0.14.2

07 May 15:59
d1e3ece

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[0.14.2] -- 2024-05-07

Changed

v0.14.1

19 Apr 14:17

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[0.14.1] -- 2024-04-19

Changed

  • remove pipestat_project_name from PipelineManager parameters
  • refactor pipestat_sample_name to pipestat_record_identifier in PipelineManager parameters
  • update requirements for pipestat 0.9.0, ubiquerg 0.8.0, and yacman 0.9.3
  • set force_overwrite to default to true, Issue #209

v0.14.0

22 Dec 16:40
3a8465a

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Pypiper v0.14.0

[0.14.0] -- 2023-12-22

Changed

  • refactor for pipestat v0.6.0 release
  • drop python 2.7
  • updated requirements
  • changed message_raw to be a value_dict when reporting to conform to pipestat
  • Fixed

  • fixed #196 and #197
  • Added

  • added force_overwrite to report_result and report_object
  • added pipestat_pipeline_type, defaulting to sample-level

v0.14.0a2

14 Dec 15:59

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v0.14.0a2 Pre-release
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v0.14.0a2

v0.14.0a1

15 Nov 23:13

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v0.14.0a1 Pre-release
Pre-release

v0.14.0a1

v0.13.3a1

04 Oct 19:57

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v0.13.3a1 Pre-release
Pre-release

v0.13.3a1

v0.13.2

02 Aug 20:26

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[0.13.2] -- 2023-08-02

Fixed

  • fixed self.new_start overriding checkpoints.