iqtree

A Python library that exposes features from IQ-TREE - efficient software for phylogenomic inference

IQ-TREE version 3: software for phylogenetics

IQ-TREE main website

IQ-TREE software version 2: phylogenetics by maximum likelihood

Fossil calibation annotation for Bayesian molecular dating 🧬

MAximum Parsimonious Likelihood Estimation in C/C++

Variational time tree inference with Graph Neural Networks

Fast Neighbor-Joining and other distance-based methods for phylogenetics

A Demo of CMaple API documentation