Finetuning integration - #79

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mzouink wants to merge 144 commits into

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finetuning_integration

Commits on Feb 9, 2026

Add HITL finetuning test data generation infrastructure

davidackerman
and
claude
committed
Add HITL finetuning test data generation infrastructure
davidackerman
committed
Add LoRA wrapper and CorrectionDataset for HITL finetuning

davidackerman
and
claude
committed
Add LoRA wrapper and CorrectionDataset for HITL finetuning
davidackerman
committed
Add LoRA training loop and CLI for HITL finetuning

davidackerman
and
claude
committed
Add LoRA training loop and CLI for HITL finetuning
davidackerman
committed
Fix LoRA wrapper for Sequential models and add comprehensive documentation

davidackerman
and
claude
committed
Fix LoRA wrapper for Sequential models and add comprehensive documentation
davidackerman
committed
Complete HITL finetuning pipeline with full component validation

davidackerman
and
claude
committed
Complete HITL finetuning pipeline with full component validation
davidackerman
committed
Fix zarr structure for Neuroglancer/OME-NGFF compatibility

davidackerman
and
claude
committed
Fix zarr structure for Neuroglancer/OME-NGFF compatibility
davidackerman
committed
Fix dataset to handle mismatched raw/mask sizes

davidackerman
and
claude
committed
Fix dataset to handle mismatched raw/mask sizes
davidackerman
committed
Disable patching to use full-size corrections for training

davidackerman
and
claude
committed
Disable patching to use full-size corrections for training
davidackerman
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Fix CLI to handle None patch_shape
davidackerman
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Fix CLI to handle None patch_shape
davidackerman
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Disable spatial augmentation for mismatched input/output sizes

davidackerman
and
claude
committed
Disable spatial augmentation for mismatched input/output sizes
davidackerman
committed

Commits on Feb 11, 2026

Commits on Feb 12, 2026

Commits on Feb 14, 2026

Commits on Feb 15, 2026

Commits on Feb 16, 2026

Commits on Feb 23, 2026

in progress
mzouink
committed

Commits on Feb 25, 2026

Merge branch 'main' into finetuning_refactor
davidackerman
committed

Commits on Feb 26, 2026

Commits on Mar 10, 2026

Commits on Mar 20, 2026

Fix annotation label corruption, persist restart params, and improve dashboard
davidackerman
committed

Commits on Mar 23, 2026

Merge main into finetuning_refactor and adopt restyle conventions
davidackerman
committed

Commits on Apr 1, 2026

Style modal borders and background for dark theme consistency
davidackerman
committed

Commits on Apr 6, 2026

Commits on Apr 14, 2026

Commits on Apr 21, 2026

Commits on Apr 22, 2026

Fix volume-zarr chunk wipe, stale stop button, and OOM mitigation loop
davidackerman
committed

Commits on Apr 23, 2026

Commits on Apr 27, 2026

Merge remote-tracking branch 'origin/finetuning_refactor' into finetuning_integration
mzouink
committed

Commits on Jun 15, 2026

fixes
mzouink
committed