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@SciLifeLab @NBISweden @BodenmillerGroup @BIIFSweden @TissUUmaps

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  1. napari/napari napari/napari Public

    napari: a fast, interactive, multi-dimensional image viewer for python

    Python 2.5k 462

  2. ome/ngff ome/ngff Public

    Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

    Python 142 58

  3. BodenmillerGroup/steinbock BodenmillerGroup/steinbock Public

    A toolkit for processing multiplexed tissue images

    Python 67 18

  4. BodenmillerGroup/readimc BodenmillerGroup/readimc Public

    Python package for reading imaging mass cytometry (IMC) files

    Python 17 9

  5. BodenmillerGroup/IMCWorkflow BodenmillerGroup/IMCWorkflow Public

    Overview repository on IMC data analysis

    7 4

  6. TissUUmaps/TissUUmaps4 TissUUmaps/TissUUmaps4 Public

    A GPU-accelerated web application for visualization, annotation and sharing of spatial biology data

    TypeScript 4