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Pull requests: loculus-project/loculus

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Pull requests list

Revert "Revert "chore(deps): bump pandas from 2.3.3 to 3.0.0 in /ingest"" dependencies Pull requests that update a dependency file ingest Ingest pipeline preview Triggers a deployment to argocd
#5939 opened Feb 4, 2026 by theosanderson Loading…
1
feat(config): add new metadataScope param config Configuration related issues, i.e. helm processing deployment Code changes targetting the deployment infrastructure preview Triggers a deployment to argocd website Tasks related to the web application
#5936 opened Feb 4, 2026 by anna-parker • Draft
3 tasks
1
data open at backend related to the loculus backend component deployment Code changes targetting the deployment infrastructure preview Triggers a deployment to argocd
#5935 opened Feb 4, 2026 by theosanderson • Draft
3 tasks
chore(deps): bump zod from 3.25.76 to 4.3.6 in /website dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#5930 opened Feb 3, 2026 by dependabot bot Loading…
chore(deps): bump the patch group in /website with 12 updates dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code preview Triggers a deployment to argocd
#5929 opened Feb 3, 2026 by dependabot bot Loading…
chore(deps): bump react-dom and @types/react-dom in /keycloak/keycloakify dependencies Pull requests that update a dependency file javascript Pull requests that update Javascript code
#5927 opened Feb 3, 2026 by dependabot bot Loading…
feat(ingest, config, actions): add datasets assembly download to mirror and allow creation of override groups in ingest github_actions Pull requests that update GitHub Actions code ingest Ingest pipeline
#5917 opened Feb 3, 2026 by anna-parker • Draft
3 tasks
1
feat(website): add count to reference selector website Tasks related to the web application
#5907 opened Jan 30, 2026 by anna-parker Loading…
2 of 3 tasks
1
9
feat(prepro): add function to process phenotype_values and extract regex preprocessing Issues related to the preprocessing component
#5885 opened Jan 27, 2026 by anna-parker Loading…
3 tasks done
1
13
docs: tips for agents on running integration tests documentation Improvements or additions to documentation e2e E2E test related
#5884 opened Jan 27, 2026 by theosanderson Loading…
5
feat(website): add feature to search multiple string fields deployment Code changes targetting the deployment infrastructure preview Triggers a deployment to argocd website Tasks related to the web application
#5881 opened Jan 26, 2026 by chaoran-chen Loading…
2 tasks done
@chaoran-chen
22
feat(website): add copy and download buttons for sequences on details… website Tasks related to the web application
#5880 opened Jan 26, 2026 by theosanderson • Draft
3 tasks
1
fix(website): change files icon on review page to be more distinct website Tasks related to the web application
#5864 opened Jan 21, 2026 by theosanderson • Draft
3 tasks
1
feat(backend, website): download of original data for revisions backend related to the loculus backend component preview Triggers a deployment to argocd website Tasks related to the web application
#5856 opened Jan 19, 2026 by chaoran-chen Loading…
3 tasks done
1
15
feat(website): Add segment presence filter for multi-segmented organisms
#5841 opened Jan 15, 2026 by Copilot AI • Draft
12 tasks done
1
@anna-parker
1
feat(website): Cumulative graph of submission on groups page website Tasks related to the web application
#5839 opened Jan 15, 2026 by theosanderson Loading…
9
wip preview Triggers a deployment to argocd
#5831 opened Jan 12, 2026 by theosanderson • Draft
3 tasks
chore(deps): bump the minor group across 1 directory with 4 updates dependencies Pull requests that update a dependency file java Pull requests that update Java code
#5812 opened Jan 7, 2026 by dependabot bot Loading…
chore(deps): bump dtolnay/rust-toolchain from 1.92 to 1.100 dependencies Pull requests that update a dependency file github_actions Pull requests that update GitHub Actions code
#5808 opened Jan 7, 2026 by dependabot bot Loading…
Helm output update_helm_output
#5807 opened Jan 7, 2026 by theosanderson • Draft
3 tasks
1
test(website): Add vitest unit tests for sequence details modal
#5789 opened Jan 3, 2026 by Copilot AI • Draft
3 tasks done
2
@corneliusroemer
chore: add GitHub Copilot instructions
#5787 opened Jan 3, 2026 by Copilot AI • Draft
3 tasks done
1
@corneliusroemer
feat(integration-tests): optimize integration tests by using bulk submission
#5785 opened Jan 3, 2026 by Copilot AI • Draft
2 of 3 tasks
1
@corneliusroemer
Make silo replicas configurable and add PDBs for HA
#5774 opened Dec 26, 2025 by google-labs-jules bot • Draft
1
fix(deployment): Use SHA256 digests and mirror all external images to GHCR update_db_schema
#5772 opened Dec 19, 2025 by Copilot AI • Draft
3 tasks done
1
@corneliusroemer
15
ProTip! no:milestone will show everything without a milestone.