Update ci.yml

Add path export within test run

Author: fmaguire

.github/workflows/ci.yml

@@ -32,10 +32,7 @@ jobs:
           export PATH=$PWD/bin:$PWD/ncbi-blast-2.16.0+/bin:$PATH >> $GITHUB_ENV
       - name: Test
         run: |
-          ls
-          pwd
-          ls bin
-          echo $PATH
+          export PATH=$PWD/bin:$PWD/ncbi-blast-2.16.0+/bin:$PATH
           abricate --setupdb
           abricate --version
           abricate --help