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@veg

iGEM/UCSD evolutionary biology and bioinformatics group

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  1. hyphy hyphy Public

    HyPhy 2.5.x (Maintenance Mode — bug fixes only). All active development has moved to HyPhy 3: https://github.com/veg/hyphy-3

    HyPhy 275 72

  2. hivtrace hivtrace Public

    JavaScript 23 15

  3. phylotree.js phylotree.js Public

    Interactive viewer of phylogenetic trees

    JavaScript 204 78

Repositories

Showing 10 of 122 repositories
  • datamonkey-js-server Public
    veg/datamonkey-js-server's past year of commit activity
    JavaScript 3 7 0 2 Updated Oct 31, 2026
  • cawlign Public
    veg/cawlign's past year of commit activity
    C++ 4 MIT 3 0 1 Updated Oct 30, 2026
  • rhiztype Public

    Rust CLI and WebAssembly (WASM) browser engine for screening aligned or unaligned HIV-1 FASTA sequences for subtype and recombinant mosaic architecture

    veg/rhiztype's past year of commit activity
    Rust 0 MIT 0 0 1 Updated Oct 30, 2026
  • hyphy-3 Public

    HyPhy v3. We are not in 1997 anymore

    veg/hyphy-3's past year of commit activity
    C++ 13 3 3 1 Updated Oct 30, 2026
  • datamonkey-js Public

    Datamonkey - Run state-of-the-art statistical models through the comfort of your browser

    veg/datamonkey-js's past year of commit activity
    JavaScript 10 10 0 10 Updated Oct 30, 2026
  • rhizaeon-code Public

    Rhizaeon recombination detection

    veg/rhizaeon-code's past year of commit activity
    HTML 0 MIT 1 0 0 Updated Oct 29, 2026
  • HyphAeon Public
    veg/HyphAeon's past year of commit activity
    Python 13 MIT 4 16 0 Updated Oct 29, 2026
  • phylotree.js Public

    Interactive viewer of phylogenetic trees

    veg/phylotree.js's past year of commit activity
    JavaScript 204 MIT 78 0 0 Updated Oct 27, 2026
  • silverback-user-manual Public

    silverback-user-manual

    veg/silverback-user-manual's past year of commit activity
    JavaScript 0 0 0 0 Updated Oct 27, 2026
  • tools-iuc Public Forked from galaxyproject/tools-iuc

    Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission

    veg/tools-iuc's past year of commit activity
    HTML 0 MIT 561 3 0 Updated Oct 26, 2026
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