Refactor and optimize code:#111
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- Introduced `_select_subsystem` function for atom selection in `mdpath.py`. - Streamlined mutual information analysis in `mdpath_tools.py`. - Removed unused imports and functions across various modules. - Enhanced path properties computation in `visualization.py`. - Updated tests to reflect code changes and removed obsolete tests. - Removed seaborn dependency from `pyproject.toml`.
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_select_subsystemfunction for atom selection inmdpath.py.mdpath_tools.py.visualization.py.pyproject.toml.