feat: new bcalm and mpralib

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=====> Diff for /github/workspace/workflow/rules/common.smk <=====

--- original
+++ new
@@ -28,7 +28,9 @@
     Calculate the size of the input file in MB.
     """
     file_size_mb = os.path.getsize(input_file) / (1024 * 1024)  # Convert bytes to MB
-    mem_gb = math.ceil((file_size_mb * scaling_factor) / 1024)  # Convert MB to GB and scale
+    mem_gb = math.ceil(
+        (file_size_mb * scaling_factor) / 1024
+    )  # Convert MB to GB and scale

     # Minimum 1 GB
     return max(mem_gb, 1) * attemt

=====> Diff for /github/workspace/workflow/rules/elements.smk <=====

--- original
+++ new
@@ -36,7 +36,10 @@
     threads: 1
     resources:
         # Adjust memory based on input size
-        mem_mb=lambda wc, input, attempt: calc_mem_gb(input[0], 450 if wc.level == "barcode" else 50, attempt) * 1024,
+        mem_mb=lambda wc, input, attempt: calc_mem_gb(
+            input[0], 450 if wc.level == "barcode" else 50, attempt
+        )
+        * 1024,
     retries: 3
     input:
         element_counts="results/{id}/quantification/{id}.{level}.element.input.tsv.gz",[INFO] 2 file(s) would be changed 😬
[INFO] 1 file(s) would be left unchanged 🎉

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Language	Validation result
SNAKEMAKE_SNAKEFMT	Fail ❌
YAML	Pass ✅

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SNAKEMAKE_SNAKEFMT

=====> Diff for /github/workspace/workflow/rules/common.smk <=====

--- original
+++ new
@@ -28,7 +28,9 @@
     Calculate the size of the input file in MB.
     """
     file_size_mb = os.path.getsize(input_file) / (1024 * 1024)  # Convert bytes to MB
-    mem_gb = math.ceil((file_size_mb * scaling_factor) / 1024)  # Convert MB to GB and scale
+    mem_gb = math.ceil(
+        (file_size_mb * scaling_factor) / 1024
+    )  # Convert MB to GB and scale

     # Minimum 1 GB
     return max(mem_gb, 1) * attemt

=====> Diff for /github/workspace/workflow/rules/elements.smk <=====

--- original
+++ new
@@ -36,7 +36,10 @@
     threads: 1
     resources:
         # Adjust memory based on input size
-        mem_mb=lambda wc, input, attempt: calc_mem_gb(input[0], 450 if wc.level == "barcode" else 50, attempt) * 1024,
+        mem_mb=lambda wc, input, attempt: calc_mem_gb(
+            input[0], 450 if wc.level == "barcode" else 50, attempt
+        )
+        * 1024,
     retries: 3
     input:
         element_counts="results/{id}/quantification/{id}.{level}.element.input.tsv.gz",[INFO] 2 file(s) would be changed 😬
[INFO] 1 file(s) would be left unchanged 🎉

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